Quality Control And Differentiall Gene Expression Results
This Is A Report Of Quality Control And Differentail Gene Expression Analysis.
Differential Gene Expression Approach Used: DESeq2
Cutoffs To Establish Differentially Regulated Genes: |Log2FC| > 0.5 & padj < 0.1
PCA Plots
2D PCA on DESeq2’s Normalized Counts
Total Explained Variance = 65.512%
3D PCA on DESeq2’s Normalized Counts
Total Explained Variance = 77.624%
2D PCA on DESeq2’s Normalized Counts
Total Explained Variance = 93.72%
3D PCA on DESeq2’s Normalized Counts
Total Explained Variance = 97.447%
Dendrograms representing sample clustering
Dendrogram on DESeq2’s Normalized Counts

Dendrogram on DESeq2 normalized counts with only DEGs

Volcano Plots
